Co-expression analysis

Gene ID	1613214_at
Gene name
Homology with Arabidopsis	Similar to At4g16015: DC1 domain-containing protein (HF=4e+0)
Module size	6 genes
NF	0.09
%ile	16.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.77	1613214_at	CB340082	-	-	4e+0	At4g16015	DC1 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.97	1607928_at	CF201793.1	-	-	5e-3	At4g08230	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.95	1618712_at	CB003306	-	-	3e-1	At4g21330	DYT1 (DYSFUNCTIONAL TAPETUM 1)	O.I.	H.G.	S.X.	Please select
0.11	11.3	0.98	1622789_x_at	CF206467.1	-	-	4e+1	At5g53590	auxin-responsive family protein	O.I.	H.G.	S.X.	Please select
0.05	6.0	0.97	1607547_at	CB005630	-	-	2e-16	At4g38180	FRS5 (FAR1-related sequence 5)	O.I.	H.G.	S.X.	Please select
0.02	3.2	0.96	1616706_at	CF207563	hypothetical LOC100265979	-	8e-11	At4g12400	stress-inducible protein, putative	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.3	97.2	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
3.1	94.6	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
3.0	94.2	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.0	94.2	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.9	93.8	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
2.9	93.8	GSM436356	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436426	V. riparia (VR, PI588259) SD, 13h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436423	V. riparia (VR, PI588259) SD, 13h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM147725	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	54
2.4	91.3	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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