Co-expression analysis

Gene ID	1613156_at
Gene name	hypothetical protein LOC100247989
Homology with Arabidopsis	Similar to At1g53400: unknown protein (HF=6e-5)
Module size	6 genes
NF	0.42
%ile	63.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	92.3	0.97	1613156_at	CF209286	hypothetical protein LOC100247989	-	6e-5	At1g53400	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.96	1618919_at	BQ797810	hypothetical protein LOC100244316	-	4e+0	At5g05113	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.97	1608054_at	CB350151	-	-	7e+0	At5g04853	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.97	1607563_at	CF203757.1	-	-	7e-49	At5g61510	NADP-dependent oxidoreductase, putative	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.97	1621721_at	CD718881	hypothetical protein LOC100248049	-	3e-17	At5g08320	unknown protein	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.97	1609562_at	CF210167	hypothetical protein LOC100255509	-	5e-52	At2g21150	XCT (XAP5 CIRCADIAN TIMEKEEPER)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.2	97.1	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
3.6	96.0	GSM147733	Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation	62
3.2	94.9	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
3.1	94.6	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
3.1	94.6	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.9	93.8	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
2.7	93.0	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
2.7	93.0	GSM147715	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	44
2.5	91.9	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
2.3	90.7	GSM299459	D_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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