Co-expression analysis

Gene ID 1613156_at
Gene name hypothetical protein LOC100247989
Homology with ArabidopsisSimilar to At1g53400: unknown protein (HF=6e-5)
Module size 6 genes
NF 0.42
%ile 63.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7792.30.971613156_atCF209286hypothetical protein LOC100247989-6e-5At1g53400unknown proteinO.I.H.G.S.X.
0.6081.90.961618919_atBQ797810hypothetical protein LOC100244316-4e+0At5g05113unknown proteinO.I.H.G.S.X.
0.5072.70.971608054_atCB350151--7e+0At5g04853unknown proteinO.I.H.G.S.X.
0.5072.70.971607563_atCF203757.1--7e-49At5g61510NADP-dependent oxidoreductase, putativeO.I.H.G.S.X.
0.4057.70.971621721_atCD718881hypothetical protein LOC100248049-3e-17At5g08320unknown proteinO.I.H.G.S.X.
0.1313.30.971609562_atCF210167hypothetical protein LOC100255509-5e-52At2g21150XCT (XAP5 CIRCADIAN TIMEKEEPER)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.297.1GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
3.696.0GSM147733Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation62Link to GEO
3.294.9GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
3.194.6GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
3.194.6GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.993.8GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
2.793.0GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
2.793.0GSM147715Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation44Link to GEO
2.591.9GSM147729Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation58Link to GEO
2.390.7GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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