Co-expression analysis

Gene ID 1613112_at
Gene name
Homology with ArabidopsisSimilar to At3g56140: unknown protein (HF=2e+0)
Module size 6 genes
NF 0.08
%ile 15.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.921613112_atCK138195.1--2e+0At3g56140unknown proteinO.I.H.G.S.X.
0.2327.50.971609313_atCF403611similar to 2-oxo acid dehydrogenase, lipoyl-binding site-6e-2At4g22320unknown proteinO.I.H.G.S.X.
0.1111.30.961614949_x_atCF202459.1--3e-3At1g0110060S acidic ribosomal protein P1 (RPP1A)O.I.H.G.S.X.
0.099.40.971607928_atCF201793.1--5e-3At4g08230glycine-rich proteinO.I.H.G.S.X.
0.034.20.971614869_atCF208077hypothetical protein LOC100251847-1e-12At1g50500HIT1 (HEAT-INTOLERANT 1)O.I.H.G.S.X.
0.034.20.971610845_atCF208629hypothetical protein LOC100245365-2e+0At1g68030PHD finger protein-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.498.3GSM436409V. riparia (VR, PI588259) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.696.0GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.395.2GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.993.8GSM436370Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.993.8GSM436420V. riparia (VR, PI588259) SD, 13h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.893.4GSM436351Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.491.3GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.390.7GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.289.9GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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