Co-expression analysis

Gene ID 1613067_at
Gene name hypothetical protein LOC100249127
Homology with ArabidopsisSimilar to At5g41910: RNA polymerase II mediator complex protein-related (HF=5e+0)
Module size 6 genes
NF 0.31
%ile 44.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.50.901613067_atCB968801hypothetical protein LOC100249127-5e+0At5g41910RNA polymerase II mediator complex protein-relatedO.I.H.G.S.X.
0.5072.70.921615444_atCF609872hypothetical protein LOC100249127-4e+0At5g37480unknown proteinO.I.H.G.S.X.
0.4464.10.931610915_atCF517795hypothetical protein LOC100268060-7e-9At2g26690nitrate transporter (NTP2)O.I.H.G.S.X.
0.4057.70.911620604_atCF568828--3e+0At4g38401unknown proteinO.I.H.G.S.X.
0.2530.50.901617595_atCD798768--1e+0At1g2996560S ribosomal protein L18A (RPL18aA)O.I.H.G.S.X.
0.1414.40.901610691_atCF211470hypothetical protein LOC100250451-1e-6At5g55570unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.697.6GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
3.495.5GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
3.395.2GSM436427V. riparia (VR, PI588259) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.094.2GSM436429V. riparia (VR, PI588259) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.094.2GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
3.094.2GSM147729Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation58Link to GEO
3.094.2GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.993.8GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.993.8GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.692.5GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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