Co-expression analysis

Gene ID	1613003_at
Gene name
Homology with Arabidopsis	Similar to At5g15440: EDL1 (EID1-like 1) (HF=7e+0)
Module size	19 genes
NF	0.16
%ile	24.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.97	99.9	0.93	1613003_at	CA817428	-	-	7e+0	At5g15440	EDL1 (EID1-like 1)	O.I.	H.G.	S.X.	Please select
0.28	37.7	0.98	1621240_at	CB981857	hypothetical protein LOC100262992	-	3e-15	At5g49060	DNAJ heat shock N-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.97	1612450_at	CA811242	hypothetical protein LOC100255989	-	6e-90	At2g06530	VPS2.1	O.I.	H.G.	S.X.	Please select
0.18	19.4	0.98	1610393_at	CD798664	hypothetical protein LOC100265545	-	4e-12	At3g11400	eukaryotic translation initiation factor 3G / eIF3g	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.97	1621945_at	CA811140	hypothetical protein LOC100241585	-	5e+0	At3g57860	UVI4-LIKE (UV-B-INSENSITIVE 4-LIKE)	O.I.	H.G.	S.X.	Please select
0.15	15.6	0.98	1619619_at	CB921527	hypothetical protein LOC100253879	-	5e-4	At3g04930	transcription regulator	O.I.	H.G.	S.X.	Please select
0.15	15.6	0.98	1622560_at	CF211302	hypothetical protein LOC100265315	-	3e-27	At3g52850	VSR1 (VACUOLAR SORTING RECEPTOR HOMOLOG 1)	O.I.	H.G.	S.X.	Please select
0.15	15.6	0.98	1617728_at	CF511110	hypothetical protein LOC100247646	-	5e-20	At1g31970	STRS1 (STRESS RESPONSE SUPPRESSOR 1)	O.I.	H.G.	S.X.	Please select
0.15	15.6	0.99	1618154_at	CF607911	hypothetical protein LOC100258219	-	3e-44	At4g24820	26S proteasome regulatory subunit, putative (RPN7)	O.I.	H.G.	S.X.	Please select
0.15	15.6	0.97	1613253_at	CB348716	hypothetical protein LOC100259168	-	2e-15	At5g65860	ankyrin repeat family protein	O.I.	H.G.	S.X.	Please select
0.15	15.6	0.98	1612407_at	CF415099	hypothetical protein LOC100248505	-	1e-14	At1g26670	VTI1B	O.I.	H.G.	S.X.	Please select
0.14	14.4	0.98	1610625_at	CD802063	hypothetical protein LOC100259247	-	6e-30	At4g08960	phosphotyrosyl phosphatase activator (PTPA) family protein	O.I.	H.G.	S.X.	Please select
0.14	14.4	0.98	1621953_s_at	CB982946	hypothetical protein LOC100252245	-	3e-33	At1g27970	NTF2B (NUCLEAR TRANSPORT FACTOR 2B)	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.98	1614380_at	CD797929	hypothetical protein LOC100267715	-	2e-1	At2g17770	ATBZIP27	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.98	1612977_at	CF204464.1	hypothetical protein LOC100266745	-	5e-53	At3g60250	CKB3	O.I.	H.G.	S.X.	Please select
0.11	11.3	0.96	1607076_s_at	CF207295	-	-	1e-2	At1g61340	F-box family protein	O.I.	H.G.	S.X.	Please select
0.08	8.5	0.97	1619631_at	CF610109	hypothetical protein LOC100242366	-	4e-19	At5g15470	GAUT14 (Galacturonosyltransferase 14)	O.I.	H.G.	S.X.	Please select
0.07	7.8	0.97	1606493_at	CD717279	hypothetical protein LOC100261073	-	3e-1	At1g67590	remorin family protein	O.I.	H.G.	S.X.	Please select
0.06	6.8	0.97	1621596_at	CB974144	hypothetical protein LOC100260248	-	1e-3	At5g12310	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.6	96.0	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.5	91.9	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.1	89.1	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
2.0	88.2	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.9	87.2	GSM436409	V. riparia (VR, PI588259) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
1.7	84.7	GSM436356	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67
1.6	83.3	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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