Co-expression analysis

Gene ID 1612965_at
Gene name hypothetical protein LOC100265776
Homology with ArabidopsisSimilar to At4g21585: ENDO4 (endonuclease 4) (HF=3e-19)
Module size 10 genes
NF 0.48
%ile 71.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.981612965_atCF518997hypothetical protein LOC100265776-3e-19At4g21585ENDO4 (endonuclease 4)O.I.H.G.S.X.
0.7491.00.981622362_atCD802017hypothetical protein LOC100254265-6e-34At2g25760protein kinase family proteinO.I.H.G.S.X.
0.6787.90.981607908_atCF372696hypothetical protein LOC100253804-4e-3At3g12140emsy N terminus domain-containing protein / ENT domain-containing proteinO.I.H.G.S.X.
0.5273.90.981621842_atCB968661hypothetical protein LOC100256561-3e-33At3g02420unknown proteinO.I.H.G.S.X.
0.4767.70.981622541_atCB342787hypothetical protein LOC100258249-4e-35At5g12190RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.4666.50.981610174_atCF404219hypothetical protein LOC100261536-1e+0At1g10590DNA-binding protein-relatedO.I.H.G.S.X.
0.4057.70.981622823_atBQ797926hypothetical LOC100261783-5e-3At2g20230-O.I.H.G.S.X.
0.3954.90.981611617_atCF373170hypothetical protein LOC100261039-3e-1At4g12150zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3548.50.981613230_atCB343417hypothetical protein LOC100250421-1e+0At1g47820unknown proteinO.I.H.G.S.X.
0.2428.70.981617753_atBQ799134hypothetical protein LOC100249945-3e-1At4g12380unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.194.6GSM299451B_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.094.2GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.993.8GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.893.4GSM299452B_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.692.5GSM299455C_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.491.3GSM287891Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.491.3GSM287893Pink soft berry C12 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.390.7GSM287889Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.390.7GSM287901Red soft berry C16 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.289.9GSM287902Red soft berry C30 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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