Co-expression analysis

Gene ID	1612962_at
Gene name
Homology with Arabidopsis	Similar to At5g35530: 40S ribosomal protein S3 (RPS3C) (HF=2e-2)
Module size	6 genes
NF	0.54
%ile	79.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.99	1612962_at	BQ794726	-	-	2e-2	At5g35530	40S ribosomal protein S3 (RPS3C)	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.98	1607582_at	CB349344	hypothetical protein LOC100260114	-	1e+0	At2g23660	LBD10 (LOB DOMAIN-CONTAINING PROTEIN 10)	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.98	1609735_at	CF372575	hypothetical protein LOC100249713	-	1e-75	At1g50030	TOR (TARGET OF RAPAMYCIN)	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.98	1614010_at	CF518977	hypothetical LOC100246762	-	4e+0	At1g60390	BURP domain-containing protein / polygalacturonase, putative	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.98	1612660_at	CB980017	hypothetical protein LOC100244096	-	1e-39	At1g20960	emb1507 (embryo defective 1507)	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.99	1619680_at	CB975224	hypothetical protein LOC100254201	-	2e+0	At3g14480	glycine/proline-rich protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.1	96.9	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
3.8	96.4	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
3.3	95.2	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
3.3	95.2	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
3.2	94.9	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
3.2	94.9	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
3.1	94.6	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
2.9	93.8	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.9	93.8	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.8	93.4	GSM147712	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	41

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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