Co-expression analysis

Gene ID	1612943_at
Gene name	hypothetical protein LOC100250133
Homology with Arabidopsis	Similar to At4g30480: tetratricopeptide repeat (TPR)-containing protein (HF=5e-1)
Module size	8 genes
NF	0.42
%ile	63.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.82	93.9	0.98	1612943_at	CB346200	hypothetical protein LOC100250133	-	5e-1	At4g30480	tetratricopeptide repeat (TPR)-containing protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1618305_at	CF208004	hypothetical protein LOC100256855	-	3e-73	At2g26990	FUS12 (FUSCA 12)	O.I.	H.G.	S.X.	Please select
0.45	64.6	0.98	1613658_at	CD801951	hypothetical protein LOC100244785	-	4e-4	At2g02970	nucleoside phosphatase family protein / GDA1/CD39 family protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.98	1608723_at	CB977157	hypothetical protein LOC100261604	-	3e-5	At5g22040	-	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.98	1611624_at	CF510451	hypothetical protein LOC100246770	-	9e-59	At3g48170	ALDH10A9	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.98	1616342_at	BQ795972	hypothetical protein LOC100258259	-	9e-2	At5g18000	transcriptional factor B3 family protein	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.98	1621535_s_at	BQ792471	hypothetical protein LOC100247214	-	6e-87	At2g18020	EMB2296 (embryo defective 2296)	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.98	1608677_at	CB977949	hypothetical protein LOC100258930	-	3e-22	At3g19130	ATRBP47B (RNA-binding protein 47B)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.2	94.9	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
3.0	94.2	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
3.0	94.2	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.9	93.8	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.9	93.8	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.7	93.0	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.5	91.9	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.5	91.9	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
2.4	91.3	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67
2.4	91.3	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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