Co-expression analysis

Gene ID	1612930_at
Gene name	hypothetical protein LOC100255839
Homology with Arabidopsis	Similar to At4g25570: ACYB-2 (HF=6e-7)
Module size	9 genes
NF	0.47
%ile	70.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	84.3	0.97	1612930_at	CB975986	hypothetical protein LOC100255839	-	6e-7	At4g25570	ACYB-2	O.I.	H.G.	S.X.	Please select
0.54	75.7	0.97	1615704_at	CB970180	hypothetical protein LOC100253600	-	9e-5	At3g22180	zinc finger (DHHC type) family protein	O.I.	H.G.	S.X.	Please select
0.48	68.8	0.98	1614475_at	CF609346	hypothetical protein LOC100263178	-	9e-18	At5g43930	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.97	1621304_at	CF415169	hypothetical protein LOC100250891	-	3e+0	At5g66170	-	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.98	1612192_s_at	CF518716	similar to UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase	-	8e-86	At5g41700	UBC8 (UBIQUITIN CONJUGATING ENZYME 8)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.98	1621053_at	CF414284	hypothetical protein LOC100258640	-	1e-9	At1g66430	pfkB-type carbohydrate kinase family protein	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.98	1618057_at	CF207962	hypothetical protein LOC100265221	-	4e+0	At5g49410	unknown protein	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.98	1616391_s_at	CD802476	hypothetical protein LOC100261930	-	3e-51	At2g27960	CKS1 (CYCLIN-DEPENDENT KINASE-SUBUNIT 1)	O.I.	H.G.	S.X.	Please select
0.37	51.7	0.97	1617299_at	CD801559	hypothetical protein LOC100249941	-	3e-31	At2g46225	ABIL1 (Abi-1-like 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.4	91.3	GSM147687	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	16
2.4	91.3	GSM147693	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	22
2.4	91.3	GSM147674	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	3
2.3	90.7	GSM147675	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	4
2.3	90.7	GSM147692	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation	21
2.1	89.1	GSM147705	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	34
1.7	84.7	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
1.7	84.7	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
1.6	83.3	GSM147699	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	28
1.6	83.3	GSM147686	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	15

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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