Co-expression analysis

Gene ID 1612914_at
Gene name hypothetical protein LOC100260580
Homology with ArabidopsisSimilar to At4g34660: SH3 domain-containing protein 2 (SH3P2) (HF=4e-19)
Module size 30 genes
NF 0.28
%ile 40.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9799.90.951612914_atCB343257hypothetical protein LOC100260580-4e-19At4g34660SH3 domain-containing protein 2 (SH3P2)O.I.H.G.S.X.
0.4666.50.971614850_atCF206621.1--1e-10At5g66290unknown proteinO.I.H.G.S.X.
0.4564.60.981613529_atCF214571hypothetical protein LOC100260925-4e+0At5g37520unknown proteinO.I.H.G.S.X.
0.4260.10.981621680_x_atCF202023.1--3e-1At1g76220unknown proteinO.I.H.G.S.X.
0.4158.70.981615885_atCF405402hypothetical protein LOC100257916-1e+0At4g15640unknown proteinO.I.H.G.S.X.
0.4057.70.971618903_atCF568988hypothetical protein LOC100248761-2e-2At1g04850ubiquitin-associated (UBA)/TS-N domain-containing proteinO.I.H.G.S.X.
0.3751.70.981609620_atCB979452--7e+0At5g51845-O.I.H.G.S.X.
0.3650.70.971617471_atBQ796087hypothetical protein LOC100266752-1e+0Atmg00850-O.I.H.G.S.X.
0.3548.50.971613937_s_atCF517439similar to NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA binding / DNA-directed RNA polymerase-3e-1At3g25440RNA bindingO.I.H.G.S.X.
0.3446.80.971608307_atCF209143hypothetical protein LOC100247674-2e-1At2g33300-O.I.H.G.S.X.
0.3345.70.971611094_s_atCF516812hypothetical protein LOC100253655-2e-11At3g56460oxidoreductase, zinc-binding dehydrogenase family proteinO.I.H.G.S.X.
0.3243.10.981608374_atCF214105--3e-1At4g03153kinase interacting family proteinO.I.H.G.S.X.
0.3141.30.971615765_x_atCF202835.1--7e-4At1g55680WD-40 repeat family proteinO.I.H.G.S.X.
0.3141.30.981609312_atCF212706hypothetical LOC100255037-1e+0At4g28397-O.I.H.G.S.X.
0.3039.40.971612201_atCF404051hypothetical protein LOC100266189-7e-5At4g32551LUG (LEUNIG)O.I.H.G.S.X.
0.2734.00.951616071_atCB978649hypothetical protein LOC100259260-5e-58At3g18480AtCASP (Arabidopsis thaliana CCAAT-displacement protein alternatively spliced product)O.I.H.G.S.X.
0.2530.50.961612420_atCD717999hypothetical protein LOC100252211-2e+0At1g19086unknown proteinO.I.H.G.S.X.
0.2530.50.961616661_atCF209343--7e-9At3g22190IQD5 (IQ-domain 5)O.I.H.G.S.X.
0.2327.50.961617972_atCB976079--7e-19At3g16950LPD1 (LIPOAMIDE DEHYDROGENASE 1)O.I.H.G.S.X.
0.2225.60.981620612_s_atCF208882similar to ADP-ribosylation factor-4e-128At2g47170ARF1A1CO.I.H.G.S.X.
0.2225.60.971622812_atCF516709similar to SAB-1e+0At2g35470unknown proteinO.I.H.G.S.X.
0.2225.60.961611380_atCF512134--1e+0At1g43670fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putativeO.I.H.G.S.X.
0.2124.00.981612222_atCB349107hypothetical protein LOC100244118-1e-3At1g16560Per1-like family proteinO.I.H.G.S.X.
0.2124.00.971611107_atCF519175hypothetical protein LOC100251666-3e-14At3g06610DNA-binding enhancer protein-relatedO.I.H.G.S.X.
0.2124.00.981613730_atCB036143hypothetical protein LOC100264670-2e-43At2g26460RED family proteinO.I.H.G.S.X.
0.2022.40.981607180_atCA816204hypothetical protein LOC100266111-1e-56At3g50000CKA2 (CASEIN KINASE II, ALPHA CHAIN 2)O.I.H.G.S.X.
0.1920.90.981606456_atCF608639hypothetical protein LOC100246144-2e-15At4g26701DNA binding / DNA topoisomerase type IO.I.H.G.S.X.
0.1920.90.981620963_atCF403847hypothetical protein LOC100247592-7e-49At5g58230MSI1 (MULTICOPY SUPRESSOR OF IRA1)O.I.H.G.S.X.
0.1414.40.971611010_atCF214416hypothetical protein LOC100250144-2e-6At4g26410-O.I.H.G.S.X.
0.1313.30.971615873_atBQ797295hypothetical protein LOC100251204-7e-18At3g52120SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
1.886.0GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
1.886.0GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
1.784.7GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
1.784.7GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO
1.784.7GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM436422V. riparia (VR, PI588259) SD, 13h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
1.683.3GSM436425V. riparia (VR, PI588259) SD, 13h 28 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.581.7GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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