Co-expression analysis

Gene ID	1612900_at
Gene name	hypothetical protein LOC100259949
Homology with Arabidopsis	Similar to At5g44585: unknown protein (HF=5e+0)
Module size	6 genes
NF	0.33
%ile	48.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.97	1612900_at	CD797784	hypothetical protein LOC100259949	-	5e+0	At5g44585	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.97	1612421_at	CF213299	hypothetical protein LOC100262002	-	4e+0	At5g13080	WRKY75	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.97	1610863_at	CD801616	cullin 1	-	2e-19	At4g02570	ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1)	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.97	1618609_s_at	BQ800563	hypothetical protein LOC100249094	-	1e+0	At4g28556	RIC7	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.97	1611871_at	CF415063	dehydroascorbate reductase	-	2e-9	At1g19570	DHAR1 (dehydroascorbate reductase)	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.97	1616425_at	CF208709	hypothetical protein LOC100260616	-	5e-7	At2g32730	26S proteasome regulatory subunit, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.1	94.6	GSM436350	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.9	93.8	GSM436399	V. riparia (VR, PI588259) LD, 15h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436424	V. riparia (VR, PI588259) SD, 13h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM287891	Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.5	91.9	GSM287889	Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.3	90.7	GSM436363	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436397	V. riparia (VR, PI588259) LD, 15h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM287892	Pink soft berry C11 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.1	89.1	GSM436427	V. riparia (VR, PI588259) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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