Co-expression analysis

Gene ID	1612893_at
Gene name	hypothetical protein LOC100243553
Homology with Arabidopsis	Similar to At4g02510: TOC159 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 159) (HF=2e-18)
Module size	6 genes
NF	0.61
%ile	88.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.97	1612893_at	CF513602	hypothetical protein LOC100243553	-	2e-18	At4g02510	TOC159 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 159)	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.98	1615236_at	BQ796877	-	-	1e+0	At5g48595	-	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1612460_s_at	CF207746	hypothetical protein LOC100245544	-	4e-20	At2g38270	CXIP2 (CAX-INTERACTING PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.57	79.8	0.98	1607285_s_at	CD013720	hypothetical protein LOC100262997	-	3e-54	At5g52520	OVA6 (OVULE ABORTION 6)	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.98	1607640_at	CF215061	hypothetical protein LOC100249595	-	1e-19	At1g65260	PTAC4 (PLASTID TRANSCRIPTIONALLY ACTIVE4)	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.97	1613278_at	CF212139	hypothetical protein LOC100255222	-	4e+0	At2g20760	protein binding / structural molecule	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.9	97.9	GSM436388	V. riparia (VR, PI588259) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.9	96.6	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.5	95.7	GSM299458	D_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.5	95.7	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.3	95.2	GSM299455	C_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.1	94.6	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.9	93.8	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.6	92.5	GSM299462	D_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.6	92.5	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.6	92.5	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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