Co-expression analysis

Gene ID 1612883_at
Gene name hypothetical protein LOC100241955
Homology with ArabidopsisSimilar to At5g20280: ATSPS1F (sucrose phosphate synthase 1F) (HF=2e-95)
Module size 6 genes
NF 0.65
%ile 91.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.951612883_atCF213322hypothetical protein LOC100241955-2e-95At5g20280ATSPS1F (sucrose phosphate synthase 1F)O.I.H.G.S.X.
0.8394.60.951606931_atCD797978hypothetical protein LOC100266572-3e-4At1g56230unknown proteinO.I.H.G.S.X.
0.6787.90.971608916_atCB007786hypothetical protein LOC100260173-2e-2At1g73390-O.I.H.G.S.X.
0.5375.20.951615374_atCB911656hypothetical protein LOC100241955-8e-1At1g34000OHP2 (ONE-HELIX PROTEIN 2)O.I.H.G.S.X.
0.4666.50.961612185_atCB008768hypothetical protein LOC100245556-3e-10At5g66460(1-4)-beta-mannan endohydrolase, putativeO.I.H.G.S.X.
0.3853.60.961616279_atBQ796307hypothetical protein LOC100260173-1e-1At1g70440SRO3 (SIMILAR TO RCD ONE 3)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.299.7GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.996.6GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.696.0GSM287882Green soft berry A21 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.495.5GSM147729Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation58Link to GEO
3.395.2GSM287875Green hard berry C17 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.294.9GSM287883Green soft berry A23 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.194.6GSM436368Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.993.8GSM287877Green hard berry B12 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.993.8GSM436428V. riparia (VR, PI588259) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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