Co-expression analysis

Gene ID 1612757_at
Gene name hypothetical protein LOC100241266
Homology with ArabidopsisSimilar to At2g32560: F-box family protein (HF=1e+0)
Module size 6 genes
NF 0.24
%ile 33.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8394.60.981612757_atCD801743hypothetical protein LOC100241266-1e+0At2g32560F-box family proteinO.I.H.G.S.X.
0.5072.70.981607756_s_atCF519234hypothetical protein LOC100241574-3e-40At3g08510ATPLC2 (PHOSPHOLIPASE C 2)O.I.H.G.S.X.
0.2937.70.981621139_atCB982951hypothetical protein LOC100262947-3e-9At5g08390-O.I.H.G.S.X.
0.2937.70.981614242_atCF211976hypothetical protein LOC100243579-1e-1At5g60800heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.1515.60.981621252_atCB978314hypothetical protein LOC100263936-2e-8At3g08620KH domain-containing proteinO.I.H.G.S.X.
0.1212.10.981618602_atCD712496hypothetical protein LOC100267246-4e-7At1g79650RAD23O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.399.8GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
7.499.2GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.196.9GSM436354Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
4.096.7GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.896.4GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.591.9GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
2.289.9GSM287894Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.088.2GSM287899Red soft berry C13 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.088.2GSM287896Pink soft berry C27 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.088.2GSM287903Red soft berry A7 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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