Co-expression analysis

Gene ID 1612756_at
Gene name hypothetical protein LOC100258541
Homology with ArabidopsisSimilar to At1g26850: dehydration-responsive family protein (HF=1e-45)
Module size 15 genes
NF 0.24
%ile 34.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9799.90.961612756_atCF207475hypothetical protein LOC100258541-1e-45At1g26850dehydration-responsive family proteinO.I.H.G.S.X.
0.3751.70.981608299_atCF603912hypothetical protein LOC100264505-2e-21At2g19520FVEO.I.H.G.S.X.
0.3650.70.981615029_atBQ796543--3e-34At1g57720elongation factor 1B-gamma, putative / eEF-1B gamma, putativeO.I.H.G.S.X.
0.3446.80.981621111_atBQ798687hypothetical protein LOC100254821-2e+0At4g33145unknown proteinO.I.H.G.S.X.
0.3039.40.981613455_atCF207343--5e-69At4g34570THY-2 (thymidylate synthase 2)O.I.H.G.S.X.
0.3039.40.981622817_atCD012829hypothetical protein LOC100251895-4e-42At2g40660tRNA-binding region domain-containing proteinO.I.H.G.S.X.
0.3039.40.981613765_atBQ798079hypothetical protein LOC100262312-1e-3At3g48750CDC2 (CELL DIVISION CONTROL 2)O.I.H.G.S.X.
0.2837.70.981614845_atCF405772hypothetical protein LOC100262902-1e+0At1g65900unknown proteinO.I.H.G.S.X.
0.2428.70.981616265_s_atCF208531--4e-20At3g05060SAR DNA-binding protein, putativeO.I.H.G.S.X.
0.2225.60.971606984_atCB919078hypothetical protein LOC100251815-8e-34At5g49720ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1)O.I.H.G.S.X.
0.1718.20.971622390_atCF510933--2e-2At5g17410tubulin family proteinO.I.H.G.S.X.
0.1616.70.971608111_atCB972142hypothetical protein LOC100247823-1e+0At1g24240ribosomal protein L19 family proteinO.I.H.G.S.X.
0.1414.40.981618999_atCF403613hypothetical protein LOC100262446-1e-21At4g02030-O.I.H.G.S.X.
0.1313.30.981619979_atCB973261hypothetical protein LOC100243832-3e-1At4g25280adenylate kinase family proteinO.I.H.G.S.X.
0.1212.10.981621149_atCF514701similar to 60S ribosomal protein L19-3e-79At1g02780emb2386 (embryo defective 2386)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.094.2GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.591.9GSM287882Green soft berry A21 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.591.9GSM287886Green soft berry C22 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.491.3GSM287901Red soft berry C16 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.390.7GSM287900Red soft berry C15 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.390.7GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.189.1GSM287898Red soft berry B14 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.189.1GSM299452B_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.088.2GSM287891Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.088.2GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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