Co-expression analysis

Gene ID	1612750_at
Gene name	hypothetical protein LOC100248749
Homology with Arabidopsis	Similar to At3g55390: integral membrane family protein (HF=2e+0)
Module size	9 genes
NF	0.51
%ile	76.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	77.3	0.95	1612750_at	CA817715	hypothetical protein LOC100248749	-	2e+0	At3g55390	integral membrane family protein	O.I.	H.G.	S.X.	Please select
0.63	84.3	0.97	1613362_at	CB339870	hypothetical protein LOC100242250	-	5e-3	At5g14710	-	O.I.	H.G.	S.X.	Please select
0.56	79.4	0.96	1610268_s_at	CB978436	hypothetical protein LOC100246993	-	6e-10	At2g42130	unknown protein	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.97	1621615_at	CD797653	hypothetical protein LOC100249461	-	2e-2	At5g14050	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.97	1610596_at	BQ799960	hypothetical protein LOC100249731	-	4e-1	At2g38740	haloacid dehalogenase-like hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.96	1613696_at	CA817501	hypothetical protein LOC100242891	-	1e+0	At2g25720	unknown protein	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.97	1620053_at	CF372394	hypothetical protein LOC100245511	-	3e-10	At4g22930	PYR4 (PYRIMIDIN 4)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.96	1621272_at	CD802339	hypothetical protein LOC100261869	-	4e+0	At5g50100	-	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.97	1621525_at	CB342932	-	-	2e-12	At1g67660	DNA binding / nuclease	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.1	96.9	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
2.9	93.8	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
2.8	93.4	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.5	91.9	GSM322366	genotype: Chardonnay - disease type: Healthy - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.4	91.3	GSM147714	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	43
2.4	91.3	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.3	90.7	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
2.0	88.2	GSM436422	V. riparia (VR, PI588259) SD, 13h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.0	88.2	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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