Co-expression analysis

Gene ID	1612732_at
Gene name
Homology with Arabidopsis	Similar to At1g53400: unknown protein (HF=2e-25)
Module size	9 genes
NF	0.06
%ile	12.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.84	94.8	0.93	1612732_at	CD714809	-	-	2e-25	At1g53400	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.95	1608570_at	CD717861	-	-	1e-3	At3g48590	NF-YC1 (NUCLEAR FACTOR Y, SUBUNIT C1)	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.97	1612000_at	CB342454	hypothetical protein LOC100260307	-	2e-1	At1g27130	ATGSTU13 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 13)	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.96	1608351_at	CK138128.1	-	-	4e-10	At4g29340	PRF4 (PROFILIN 4)	O.I.	H.G.	S.X.	Please select
0.09	9.4	0.95	1616747_at	CF205411.1	-	-	1e-15	At4g09012	-	O.I.	H.G.	S.X.	Please select
0.06	6.8	0.95	1613977_at	CF208330	-	-	4e+0	At4g01310	ribosomal protein L5 family protein	O.I.	H.G.	S.X.	Please select
0.04	5.2	0.95	1614622_at	CB910360	hypothetical protein LOC100258256	-	3e-2	At4g17090	CT-BMY (CHLOROPLAST BETA-AMYLASE)	O.I.	H.G.	S.X.	Please select
0.04	5.2	0.95	1616455_s_at	BQ792207	hypothetical protein LOC100250281	-	4e-1	At4g33750	-	O.I.	H.G.	S.X.	Please select
0.02	3.2	0.95	1611197_at	CA812412	hypothetical protein LOC100259765	-	4e-16	At1g78895	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.3	95.2	GSM147681	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	10
2.9	93.8	GSM299457	C_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.5	91.9	GSM299460	D_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.3	90.7	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.1	89.1	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.0	88.2	GSM299456	C_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.0	88.2	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.0	88.2	GSM299454	B_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
1.9	87.2	GSM299458	D_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
1.9	87.2	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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