Co-expression analysis

Gene ID 1612710_at
Gene name hypothetical protein LOC100250048
Homology with ArabidopsisSimilar to At5g51260: acid phosphatase, putative (HF=9e-2)
Module size 6 genes
NF 0.06
%ile 13.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7792.30.911612710_atCF415064hypothetical protein LOC100250048-9e-2At5g51260acid phosphatase, putativeO.I.H.G.S.X. protein LOC100262551-1e-64At3g60750transketolase, putativeO.I.H.G.S.X. protein LOC100245465-2e-6At5g04630CYP77A9O.I.H.G.S.X. GTP-binding protein, putativeO.I.H.G.S.X. protein LOC100262892-2e-8At3g14310ATPME3O.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.3141.30.911613054_atBQ794856hypothetical protein LOC100257133-1e-25At4g34760auxin-responsive family proteinO.I.H.G.S.X.
0.2734.00.941609765_s_atCB007712leucoanthocyanidin dioxygenase-6e-20At4g22880LDOX (LEUCOANTHOCYANIDIN DIOXYGENASE)O.I.H.G.S.X.
0.1920.90.881611970_atCF207195hypothetical protein LOC100253211-1e-1At5g11910esterase/lipase/thioesterase family proteinO.I.H.G.S.X.
0.1920.90.921616958_s_atCF371819hypothetical protein LOC100248073-1e-3Atmg00840-O.I.H.G.S.X.
0.1718.20.941620140_atCF208989hypothetical protein LOC100258559-1e-10At1g60390BURP domain-containing protein / polygalacturonase, putativeO.I.H.G.S.X.
0.1515.60.901620840_atCB968965hypothetical protein LOC100244103-2e-5At3g29030EXPA5 (EXPANSIN A5)O.I.H.G.S.X.
0.1313.30.891611577_atAF141898.1--6e-41At2g45960PIP1B (NAMED PLASMA MEMBRANE INTRINSIC PROTEIN 1B)O.I.H.G.S.X.
0.1313.30.921612134_atCF204393.1similar to anthocyanidin reductase-6e-3At2g02400cinnamoyl-CoA reductase familyO.I.H.G.S.X.
0.1212.10.931616850_atCF208300hypothetical protein LOC100265220-5e-1At5g37480unknown proteinO.I.H.G.S.X.
0.1111.30.931619457_atCB969731hypothetical protein LOC100265802-7e-12At1g78580ATTPS1 (TREHALOSE-6-PHOSPHATE SYNTHASE)O.I.H.G.S.X.

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.094.2GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
3.094.2GSM147729Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation58Link to GEO
2.793.0GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.591.9GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
2.390.7GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
2.390.7GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.289.9GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.289.9GSM147719Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation48Link to GEO
2.289.9GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.189.1GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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