Co-expression analysis

Gene ID 1612710_at
Gene name hypothetical protein LOC100250048
Homology with ArabidopsisSimilar to At5g51260: acid phosphatase, putative (HF=9e-2)
Module size 6 genes
NF 0.06
%ile 13.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7792.30.911612710_atCF415064hypothetical protein LOC100250048-9e-2At5g51260acid phosphatase, putativeO.I.H.G.S.X. protein LOC100262551-1e-64At3g60750transketolase, putativeO.I.H.G.S.X. protein LOC100245465-2e-6At5g04630CYP77A9O.I.H.G.S.X. GTP-binding protein, putativeO.I.H.G.S.X. protein LOC100262892-2e-8At3g14310ATPME3O.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.094.2GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
3.094.2GSM147729Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation58Link to GEO
2.793.0GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.591.9GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
2.390.7GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
2.390.7GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.289.9GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.289.9GSM147719Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation48Link to GEO
2.289.9GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.189.1GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.13317.1.S1_at, orthologous to the query gene, 1612710_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6785.8Zm.13317.1.S1_atAt5g51260hypothetical protein LOC100277679-2e-1At3g55790unknown proteinO.I.H.G.S.X.
0.5571.6Zm.5987.1.A2_a_atAt5g51260cysteine protease 1 /// cysteine protease 1 /// cysteine proteinase Mir3-7e-14At5g43060cysteine proteinase, putative / thiol protease, putativeO.I.H.G.S.X.
0.4048.5Zm.17849.1.S1_atAt5g51260hypothetical protein LOC100192672-1e-71At1g10950endomembrane protein 70, putativeO.I.H.G.S.X.
0.2828.1Zm.10265.1.A1_atAt5g51260hypothetical protein LOC100279289-2e-4At3g02090mitochondrial processing peptidase beta subunit, putativeO.I.H.G.S.X.
0.1811.6Zm.12954.1.A1_atAt5g51260ADP-ribosylation factor-1e-26At2g18390TTN5 (TITAN 5)O.I.H.G.S.X.
0.125.9Zm.9425.1.A1_a_atAt5g51260hypothetical protein LOC100274829-2e+1At5g23440FTRA1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 1)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.

Back to the CoP portal site

Back to the KAGIANA project homepage