Co-expression analysis

Gene ID 1612710_at
Gene name hypothetical protein LOC100250048
Homology with ArabidopsisSimilar to At5g51260: acid phosphatase, putative (HF=9e-2)
Module size 6 genes
NF 0.06
%ile 13.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7792.30.911612710_atCF415064hypothetical protein LOC100250048-9e-2At5g51260acid phosphatase, putativeO.I.H.G.S.X. protein LOC100262551-1e-64At3g60750transketolase, putativeO.I.H.G.S.X. protein LOC100245465-2e-6At5g04630CYP77A9O.I.H.G.S.X. GTP-binding protein, putativeO.I.H.G.S.X. protein LOC100262892-2e-8At3g14310ATPME3O.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.094.2GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
3.094.2GSM147729Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation58Link to GEO
2.793.0GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.591.9GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
2.390.7GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
2.390.7GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.289.9GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.289.9GSM147719Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation48Link to GEO
2.289.9GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.189.1GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, Gma.16134.1.A1_s_at, orthologous to the query gene, 1612710_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6382.9Gma.16134.1.A1_s_atAt5g51260--4e+0At5g24770VSP2 (VEGETATIVE STORAGE PROTEIN 2)O.I.H.G.S.X.
0.6282.1Gma.5496.1.S1_s_atAt5g51260--2e-2At3g24250glycine-rich proteinO.I.H.G.S.X.
0.5979.5Gma.18014.2.S1_x_atAt5g51260--2e-3At2g42840PDF1 (PROTODERMAL FACTOR 1)O.I.H.G.S.X.
0.5273.1Gma.11029.1.S1_atAt5g51260--1e-1At5g45670GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.5071.7GmaAffx.39719.1.S1_atAt5g51260--9e-2At5g61660glycine-rich proteinO.I.H.G.S.X.
0.4665.5GmaAffx.88546.1.S1_atAt5g51260--1e-1At3g50400GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.4665.5GmaAffx.6553.1.S1_atAt5g51260--1e+0At4g25410DNA binding / transcription factorO.I.H.G.S.X.
0.4259.3Gma.2058.1.S1_atAt5g51260--2e-35At3g51670SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinO.I.H.G.S.X.
0.4259.3Gma.4558.1.A1_atAt5g51260--1e-3At1g75890family II extracellular lipase 2 (EXL2)O.I.H.G.S.X.
0.4158.1GmaAffx.43208.1.A1_atAt5g51260--2e-1At3g24050GATA transcription factor 1 (GATA-1)O.I.H.G.S.X.
0.3650.8GmaAffx.21782.1.A1_atAt5g51260--4e+0At5g24316proline-rich family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.

Back to the CoP portal site

Back to the KAGIANA project homepage