Co-expression analysis

Gene ID 1612637_at
Gene name hypothetical protein LOC100259097
Homology with ArabidopsisSimilar to At5g13390: NEF1 (NO EXINE FORMATION 1) (HF=2e-3)
Module size 6 genes
NF 0.57
%ile 84.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7390.80.981612637_atCB982953hypothetical protein LOC100259097-2e-3At5g13390NEF1 (NO EXINE FORMATION 1)O.I.H.G.S.X.
0.6081.90.981606693_atCF510824hypothetical protein LOC100265371-3e-43At5g05670signal recognition particle bindingO.I.H.G.S.X.
0.5375.20.981620044_s_atCF209634hypothetical protein LOC100247307-7e-8At5g61510NADP-dependent oxidoreductase, putativeO.I.H.G.S.X.
0.5072.70.991610114_atCD003699similar to SPla/RYanodine receptor (SPRY) domain-containing protein-8e+0At5g51710KEA5O.I.H.G.S.X.
0.4666.50.981620337_atCF213940similar to ATCNGC5 (CYCLIC NUCLEOTIDE GATED CHANNEL 5); calmodulin binding / cyclic nucleotide binding / potassium channel-2e-5At5g62500ATEB1B (END BINDING PROTEIN 1B)O.I.H.G.S.X.
0.3345.70.981611958_atBQ800100hypothetical protein LOC100265795-8e-18At5g66930unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.498.3GSM436429V. riparia (VR, PI588259) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
4.897.8GSM436428V. riparia (VR, PI588259) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
4.297.1GSM436427V. riparia (VR, PI588259) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.595.7GSM436406V. riparia (VR, PI588259) LD, 15h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.395.2GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
3.294.9GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO
3.094.2GSM436408V. riparia (VR, PI588259) LD, 15h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM436425V. riparia (VR, PI588259) SD, 13h 28 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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