Co-expression analysis

Gene ID	1612597_at
Gene name	hypothetical protein LOC100245968
Homology with Arabidopsis	Similar to At4g22745: MBD1 (HF=3e-5)
Module size	11 genes
NF	0.32
%ile	45.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.69	88.3	0.96	1612597_at	CD797662	hypothetical protein LOC100245968	-	3e-5	At4g22745	MBD1	O.I.	H.G.	S.X.	Please select
0.52	73.9	0.96	1622402_at	CD799344	hypothetical protein LOC100241730	-	4e+0	At3g15260	protein phosphatase 2C, putative / PP2C, putative	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1617461_at	CF609620	hypothetical protein LOC100245670	-	1e-1	At5g25360	unknown protein	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.97	1615682_s_at	CA809122	hypothetical protein LOC100247119	-	2e-15	At4g38740	ROC1 (ROTAMASE CYP 1)	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.98	1620284_at	CA817004	hypothetical protein LOC100249470	-	1e-17	At4g35220	cyclase family protein	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.98	1619039_at	CF405804	hypothetical protein LOC100261285	-	2e-3	At4g14440	HCD1 (3-HYDROXYACYL-COA DEHYDRATASE 1)	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.98	1617485_at	CF209626	-	-	2e-8	At5g66080	protein phosphatase 2C family protein / PP2C family protein	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.98	1607758_at	BQ796718	hypothetical protein LOC100267502	-	3e-20	At1g75950	SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.98	1617058_s_at	CA813874	hypothetical protein LOC100246864	-	4e+0	At5g04130	DNA topoisomerase, ATP-hydrolyzing, putative / DNA topoisomerase II, putative / DNA gyrase, putative	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.98	1615315_at	CB921193	hypothetical protein LOC100251685	-	5e-54	At4g21450	vesicle-associated membrane family protein / VAMP family protein	O.I.	H.G.	S.X.	Please select
0.10	10.3	0.97	1619905_at	CF404235	hypothetical protein LOC100263242	-	2e-1	At2g34160	nucleic acid binding	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.8	97.8	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
3.2	94.9	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.9	93.8	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.6	92.5	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.6	92.5	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
2.4	91.3	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.4	91.3	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.2	89.9	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.2	89.9	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.2	89.9	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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