Co-expression analysis

Gene ID	1612583_at
Gene name
Homology with Arabidopsis	Similar to Atcg00730: - (HF=9e-5)
Module size	6 genes
NF	0.01
%ile	1.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.74	1612583_at	CB003299	-	-	9e-5	Atcg00730	-	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.91	1606852_at	CF415037	-	-	3e-5	At3g03480	CHAT (acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase)	O.I.	H.G.	S.X.	Please select
0.02	3.2	0.91	1610581_at	BQ798257	hypothetical protein LOC100249288	-	2e-14	At2g24395	chaperone protein dnaJ-related	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.92	1612237_at	BQ795624	-	-	8e-11	At4g24240	WRKY7	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.92	1618444_at	CD797855	hypothetical protein LOC100251001	-	1e+0	At1g50800	unknown protein	O.I.	H.G.	S.X.	Please select
-	0.5	0.93	1607928_at	CF201793.1	-	-	5e-3	At4g08230	glycine-rich protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.7	96.2	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.6	96.0	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.9	93.8	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.8	93.4	GSM299451	B_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.6	92.5	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.6	92.5	GSM436420	V. riparia (VR, PI588259) SD, 13h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.4	91.3	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
2.4	91.3	GSM322366	genotype: Chardonnay - disease type: Healthy - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.2	89.9	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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