Co-expression analysis

Gene ID	1612525_at
Gene name	hypothetical protein LOC100263804
Homology with Arabidopsis	Similar to At1g77910: unknown protein (HF=2e+0)
Module size	6 genes
NF	0.43
%ile	64.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.56	79.4	0.90	1612525_at	CF516179	hypothetical protein LOC100263804	-	2e+0	At1g77910	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.87	1619775_at	CA807881	hypothetical protein LOC100263804	-	5e+0	At5g62880	ARAC10	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.90	1614158_at	CF513796	hypothetical protein LOC100256995	-	2e+0	At1g62720	-	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.90	1609526_at	CF210472	hypothetical protein LOC100261349	-	2e+0	At5g47520	AtRABA5a (Arabidopsis Rab GTPase homolog A5a)	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.93	1616098_at	CF514166	hypothetical protein LOC100244716	-	3e-4	At5g54840	SGP1	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.90	1611115_s_at	CB344303	hypothetical protein LOC100244716	-	3e-20	At3g21700	SGP2	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.9	93.8	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436381	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436373	Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436363	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM147675	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	4
2.0	88.2	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.0	88.2	GSM147693	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	22
2.0	88.2	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
1.8	86.0	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
1.8	86.0	GSM147673	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	2

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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