Co-expression analysis

Gene ID 1612469_at
Gene name hypothetical protein LOC100248700
Homology with ArabidopsisSimilar to At4g34190: SEP1 (STRESS ENHANCED PROTEIN 1) (HF=3e-5)
Module size 6 genes
NF 0.58
%ile 85.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5375.20.961612469_atCF205528.1hypothetical protein LOC100248700-3e-5At4g34190SEP1 (STRESS ENHANCED PROTEIN 1)O.I.H.G.S.X.
0.6787.90.961606526_atBQ799338hypothetical protein LOC100244223-4e-3At3g07565DNA bindingO.I.H.G.S.X.
0.5779.80.971614462_atCB343121--4e-63Atcg00300-O.I.H.G.S.X.
0.5375.20.961614994_atCB970828hypothetical protein LOC100260207-2e-3At2g04570GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.5375.20.961620152_atCD004112hypothetical protein LOC100252793-4e-1At2g28500LBD11 (LOB DOMAIN-CONTAINING PROTEIN 11)O.I.H.G.S.X.
0.4666.50.961610351_atCF372826hypothetical LOC100251008-4e-1At2g28500LBD11 (LOB DOMAIN-CONTAINING PROTEIN 11)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.194.6GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.893.4GSM436351Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM436368Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
2.591.9GSM436393V. riparia (VR, PI588259) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM436413V. riparia (VR, PI588259) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436366Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436409V. riparia (VR, PI588259) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM147675Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation4Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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