Co-expression analysis

Gene ID	1612468_at
Gene name	hypothetical protein LOC100255261
Homology with Arabidopsis	Similar to At1g70210: CYCD1 (HF=2e-8)
Module size	6 genes
NF	0.42
%ile	62.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	77.3	0.93	1612468_at	CA815164	hypothetical protein LOC100255261	-	2e-8	At1g70210	CYCD1	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.95	1609148_at	CF213127	hypothetical protein LOC100245363	-	9e-15	At3g15270	SPL5 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 5)	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.93	1608794_a_at	CF517708	hypothetical protein LOC100255261	-	1e+0	At2g19480	NAP1	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.95	1612180_at	CF608682	hypothetical protein LOC100243320	-	5e-18	At5g60450	ARF4 (AUXIN RESPONSE FACTOR 4)	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.93	1606591_at	CB004415	hypothetical protein LOC100263197	-	4e+0	At5g19172	-	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.95	1607426_at	AF159124.1	beta-galactosidase	-	9e-26	At4g36360	BGAL3 (beta-galactosidase 3)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.8	93.4	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.7	93.0	GSM147715	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	44
2.5	91.9	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.5	91.9	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
2.5	91.9	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
2.4	91.3	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
2.4	91.3	GSM147733	Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation	62
2.3	90.7	GSM147714	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	43
2.2	89.9	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.2	89.9	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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