Co-expression analysis

Gene ID 1612464_at
Gene name hypothetical protein LOC100257926
Homology with ArabidopsisSimilar to At1g64930: CYP89A7 (HF=2e-9)
Module size 25 genes
NF 0.33
%ile 48.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7289.70.861612464_atCF208027hypothetical protein LOC100257926-2e-9At1g64930CYP89A7O.I.H.G.S.X.
0.7189.50.891608981_atCF209511hypothetical protein LOC100260284-2e-4At2g39410hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.4767.70.901618132_atCB976959hypothetical protein LOC100258696-5e-15At1g69850ATNRT1:2 (ARABIDOPSIS THALIANA NITRATE TRANSPORTER 1:2)O.I.H.G.S.X.
0.4260.10.951608583_atBG273843hypothetical protein LOC100259296-2e-8At1g23800ALDH2B7O.I.H.G.S.X.
0.4158.70.921612177_atCD798227--3e+0At3g63210MARD1O.I.H.G.S.X.
0.4158.70.941610012_s_atCA814663--3e-1At3g29030EXPA5 (EXPANSIN A5)O.I.H.G.S.X.
0.3954.90.951615556_atCB969107hypothetical protein LOC100256985-5e-17At2g28680cupin family proteinO.I.H.G.S.X.
0.3954.90.891611613_atBQ796771hypothetical protein LOC100256970-3e+0At4g15630integral membrane family proteinO.I.H.G.S.X.
0.3853.60.941612354_atCF207154hypothetical protein LOC100259498-5e-3At3g28050nodulin MtN21 family proteinO.I.H.G.S.X.
0.3650.70.911612919_atCB971032--4e+0At2g33510protein bindingO.I.H.G.S.X.
0.3650.70.901621448_atBQ796150hypothetical protein LOC100251801-7e-3At5g07680ANAC080 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 80)O.I.H.G.S.X.
0.3446.80.921612108_atBQ800036hypothetical protein LOC100248099-2e-1At3g16330unknown proteinO.I.H.G.S.X.
0.3345.70.921607846_atCF208499--2e-10At2g42610LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10)O.I.H.G.S.X.
0.3243.10.921620855_atCB346224similar to putative mitogen-activated protein kinase kinase-7e-8At4g26070MEK1 (MAP KINASE/ ERK KINASE 1)O.I.H.G.S.X.
0.3039.40.961621259_atBQ792070hypothetical protein LOC100256240-2e-33At5g04740ACT domain-containing proteinO.I.H.G.S.X.
0.2837.70.951611198_s_atCF413741nhx1 antiporter-4e-1At4g12060Clp amino terminal domain-containing proteinO.I.H.G.S.X.
0.2632.00.961609412_atCF516257hypothetical protein LOC100251928-7e-86At4g31750WIN2 (HOPW1-1-INTERACTING 2)O.I.H.G.S.X.
0.2632.00.961607281_atCB976932hypothetical protein LOC100247365-5e-115At5g55190RAN3 (RAN GTPASE 3)O.I.H.G.S.X.
0.2327.50.951612773_atCF215183hypothetical protein LOC100264940-5e-15At5g27410aminotransferase class IV family proteinO.I.H.G.S.X.
0.2225.60.901607937_atBQ793125--3e+0At5g28820unknown proteinO.I.H.G.S.X.
0.2124.00.921617551_atCF607794hypothetical protein LOC100249114-4e-19At2g24270ALDH11A3O.I.H.G.S.X.
0.2022.40.951611966_atCB978373hypothetical protein LOC100262662-3e-12At4g00110GAE3 (UDP-D-GLUCURONATE 4-EPIMERASE 3)O.I.H.G.S.X.
0.1920.90.971612267_atCF211274similar to NADP-specific isocitrate dehydrogenase-9e-65At5g14590isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putativeO.I.H.G.S.X.
0.1920.90.941617388_atCF215211hypothetical protein LOC100260437-3e-30At3g55530SDIR1 (SALT- AND DROUGHT-INDUCED RING FINGER1)O.I.H.G.S.X.
0.1515.60.951617082_a_atCA809479--1e-20At3g09770zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
1.886.0GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
1.784.7GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
1.784.7GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
1.683.3GSM147699Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation28Link to GEO
1.683.3GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.683.3GSM299456C_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.683.3GSM287900Red soft berry C15 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.683.3GSM287901Red soft berry C16 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.683.3GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM299458D_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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