Co-expression analysis

Gene ID	1612436_s_at
Gene name	isoflavone reductase-like protein 3
Homology with Arabidopsis	Similar to At5g20520: WAV2 (WAVY GROWTH 2) (HF=1e+0)
Module size	6 genes
NF	0.01
%ile	3.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	94.6	0.75	1612436_s_at	CF209460	isoflavone reductase-like protein 3	-	1e+0	At5g20520	WAV2 (WAVY GROWTH 2)	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.75	1616064_at	CF205270.1	-	-	1e-4	At3g47540	chitinase, putative	O.I.	H.G.	S.X.	Please select
0.11	11.3	0.86	1613586_at	CF513392	hypothetical protein LOC100245607	-	2e-3	At4g20830	FAD-binding domain-containing protein	O.I.	H.G.	S.X.	Please select
0.03	4.2	0.86	1608931_at	CD799025	similar to AO (L-ASPARTATE OXIDASE); L-aspartate oxidase	-	1e+1	At5g41390	-	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.79	1617421_at	CF205705.1	-	-	1e+0	At5g20520	WAV2 (WAVY GROWTH 2)	O.I.	H.G.	S.X.	Please select
-	0.5	0.86	1621026_at	CF519288	hypothetical protein LOC100242241	-	1e-22	At3g28480	oxidoreductase, 2OG-Fe(II) oxygenase family protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.2	99.5	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.8	93.4	GSM147703	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 4 h post inoculation	32
2.6	92.5	GSM436408	V. riparia (VR, PI588259) LD, 15h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436402	V. riparia (VR, PI588259) LD, 15h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM287888	Green soft berry C24 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.4	91.3	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.2	89.9	GSM147672	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	1
2.0	88.2	GSM147678	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	7
2.0	88.2	GSM436422	V. riparia (VR, PI588259) SD, 13h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436429	V. riparia (VR, PI588259) SD, 13h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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