Co-expression analysis

Gene ID	1612432_at
Gene name	hypothetical protein LOC100261638
Homology with Arabidopsis	Similar to At1g17200: integral membrane family protein (HF=5e+0)
Module size	6 genes
NF	0.50
%ile	75.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	81.9	0.91	1612432_at	CA818379	hypothetical protein LOC100261638	-	5e+0	At1g17200	integral membrane family protein	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.96	1620683_at	CA811381	hypothetical protein LOC100245630	-	8e-9	At4g26160	ACHT1 (ATYPICAL CYS HIS RICH THIOREDOXIN 1)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.94	1608259_at	CF205412.1	hypothetical protein LOC100255358	-	2e-6	At5g59520	ZIP2	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.96	1619820_s_at	CA811381	hypothetical protein LOC100245630	-	8e-9	At4g26160	ACHT1 (ATYPICAL CYS HIS RICH THIOREDOXIN 1)	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.94	1622760_at	CD719223	hypothetical protein LOC100266427	-	1e+0	At3g61920	unknown protein	O.I.	H.G.	S.X.	Please select
0.34	46.8	0.92	1619513_at	CA817243	hypothetical protein LOC100247939	-	4e-7	At2g33600	cinnamoyl-CoA reductase family	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.6	97.6	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.5	97.5	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.8	96.4	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.7	96.2	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.7	96.2	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.8	93.4	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436357	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM287888	Green soft berry C24 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.6	92.5	GSM322370	genotype: Incrocio Manzoni - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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