Co-expression analysis

Gene ID 1612186_at
Gene name hypothetical protein LOC100241494
Homology with ArabidopsisSimilar to At5g18250: unknown protein (HF=1e+1)
Module size 6 genes
NF 0.18
%ile 27.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8394.60.931612186_atCD800937hypothetical protein LOC100241494-1e+1At5g18250unknown proteinO.I.H.G.S.X.
0.4361.50.931606987_atCF405059hypothetical protein LOC100260919-1e+0At2g31750UGT74D1 (UDP-glucosyl transferase 74D1)O.I.H.G.S.X.
0.4057.70.951618478_atCF515277hypothetical protein LOC100259390-4e-3At2g34850MEE25 (maternal effect embryo arrest 25)O.I.H.G.S.X.
0.2327.50.941621366_s_atCF204284.1hypothetical protein LOC100259669-4e-1At3g20450-O.I.H.G.S.X.
0.077.80.931621009_s_atCF519017--9e-2At4g01590unknown proteinO.I.H.G.S.X.
0.066.80.931614440_atBQ7969223-deoxy-D-arabino-heptulosonate 7-phosphate synthase-2e-53At4g39980DHS1 (3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.893.4GSM287901Red soft berry C16 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.692.5GSM287904Red soft berry C31 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.591.9GSM287900Red soft berry C15 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.491.3GSM287899Red soft berry C13 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.491.3GSM287897Red soft berry C29 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.390.7GSM287902Red soft berry C30 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.390.7GSM287903Red soft berry A7 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.289.9GSM436429V. riparia (VR, PI588259) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436423V. riparia (VR, PI588259) SD, 13h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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