Co-expression analysis

Gene ID 1612122_at
Gene name hypothetical protein LOC100246317 /// hypothetical protein LOC100254873
Homology with ArabidopsisSimilar to At3g13870: RHD3 (ROOT HAIR DEFECTIVE 3) (HF=1e-17)
Module size 6 genes
NF 0.49
%ile 73.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5980.60.991612122_atBQ800294hypothetical protein LOC100246317 /// hypothetical protein LOC100254873-1e-17At3g13870RHD3 (ROOT HAIR DEFECTIVE 3)O.I.H.G.S.X.
0.5375.20.991606735_atCB970224hypothetical protein LOC100249353-4e+0At3g15420unknown proteinO.I.H.G.S.X.
0.4666.50.991613905_atCF210463hypothetical protein LOC100254141-3e-13At5g08160ATPK3O.I.H.G.S.X.
0.4666.50.991613731_atCF513972hypothetical protein LOC100248748-2e-5At5g63840RSW3 (RADIAL SWELLING 3)O.I.H.G.S.X.
0.3853.60.991612431_atCA810329--1e+0At2g16720MYB7 (MYB DOMAIN PROTEIN 7)O.I.H.G.S.X.
0.3548.50.991608671_atCF511645hypothetical protein LOC100243213-1e+0At5g65609unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.198.1GSM147709Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation38Link to GEO
4.797.7GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
4.297.1GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
3.896.4GSM147733Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation62Link to GEO
3.896.4GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
3.796.2GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
3.696.0GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
3.696.0GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
3.395.2GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.692.5GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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