Co-expression analysis

Gene ID	1612066_at
Gene name	beclin 1 protein
Homology with Arabidopsis	Similar to At3g61710: autophagy protein Apg6 family (HF=5e-48)
Module size	11 genes
NF	0.63
%ile	89.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.70	88.6	0.98	1612066_at	CF607715	beclin 1 protein	-	5e-48	At3g61710	autophagy protein Apg6 family	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.98	1617936_at	BQ797736	similar to 26S proteasome subunit RPN5b	-	3e-23	At5g64760	RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B)	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.98	1617898_at	CF605263	hypothetical protein LOC100244372	-	3e-1	At5g49610	F-box family protein	O.I.	H.G.	S.X.	Please select
0.63	84.3	0.98	1614946_at	CF510992	hypothetical protein LOC100258219	-	8e-64	At4g24820	26S proteasome regulatory subunit, putative (RPN7)	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.98	1609756_at	CF604406	hypothetical protein LOC100263684	-	6e-3	At1g18830	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.59	80.6	0.98	1620627_at	CF214379	hypothetical protein LOC100259195	-	1e-22	At1g20110	zinc finger (FYVE type) family protein	O.I.	H.G.	S.X.	Please select
0.59	80.6	0.98	AFFX-Vvi-actin-5_at		actin 1	-			-	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.98	1611078_a_at	CF518728	hypothetical protein LOC100260925	-	1e-7	At1g32230	RCD1 (RADICAL-INDUCED CELL DEATH1)	O.I.	H.G.	S.X.	Please select
0.52	73.9	0.98	1616733_s_at	CB981317	hypothetical protein LOC100255975	-	1e-3	At5g56610	dual specificity protein phosphatase family protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1614631_at	CB979660	hypothetical protein LOC100254376	-	1e-137	At5g19990	RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.98	1607136_at	CF605014	hypothetical protein LOC100257366	-	4e-28	At4g38630	RPN10 (REGULATORY PARTICLE NON-ATPASE 10)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.3	90.7	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
2.2	89.9	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.2	89.9	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.2	89.9	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.2	89.9	GSM147730	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	59
2.1	89.1	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67
2.1	89.1	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
2.1	89.1	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.0	88.2	GSM147731	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	60
2.0	88.2	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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