Co-expression analysis

Gene ID 1612066_at
Gene name beclin 1 protein
Homology with ArabidopsisSimilar to At3g61710: autophagy protein Apg6 family (HF=5e-48)
Module size 11 genes
NF 0.63
%ile 89.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7088.60.981612066_atCF607715beclin 1 protein-5e-48At3g61710autophagy protein Apg6 familyO.I.H.G.S.X.
0.8093.60.981617936_atBQ797736similar to 26S proteasome subunit RPN5b-3e-23At5g64760RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B)O.I.H.G.S.X.
0.7189.50.981617898_atCF605263hypothetical protein LOC100244372-3e-1At5g49610F-box family proteinO.I.H.G.S.X.
0.6384.30.981614946_atCF510992hypothetical protein LOC100258219-8e-64At4g2482026S proteasome regulatory subunit, putative (RPN7)O.I.H.G.S.X.
0.6081.90.981609756_atCF604406hypothetical protein LOC100263684-6e-3At1g18830transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.5980.60.981620627_atCF214379hypothetical protein LOC100259195-1e-22At1g20110zinc finger (FYVE type) family proteinO.I.H.G.S.X.
0.5980.60.98AFFX-Vvi-actin-5_atactin 1--O.I.H.G.S.X.
0.5375.20.981611078_a_atCF518728hypothetical protein LOC100260925-1e-7At1g32230RCD1 (RADICAL-INDUCED CELL DEATH1)O.I.H.G.S.X.
0.5273.90.981616733_s_atCB981317hypothetical protein LOC100255975-1e-3At5g56610dual specificity protein phosphatase family proteinO.I.H.G.S.X.
0.5072.70.991614631_atCB979660hypothetical protein LOC100254376-1e-137At5g19990RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)O.I.H.G.S.X.
0.4260.10.981607136_atCF605014hypothetical protein LOC100257366-4e-28At4g38630RPN10 (REGULATORY PARTICLE NON-ATPASE 10)O.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.390.7GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
2.289.9GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.289.9GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
2.289.9GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.289.9GSM147730Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation59Link to GEO
2.189.1GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67Link to GEO
2.189.1GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
2.189.1GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.088.2GSM147731Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation60Link to GEO
2.088.2GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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