Co-expression analysis

Gene ID 1612012_at
Gene name hypothetical protein LOC100242215
Homology with ArabidopsisSimilar to At3g04010: glycosyl hydrolase family 17 protein (HF=7e-5)
Module size 6 genes
NF 0.01
%ile 0.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.751612012_atCF207478hypothetical protein LOC100242215-7e-5At3g04010glycosyl hydrolase family 17 proteinO.I.H.G.S.X.
0.045.20.941618288_atCF202459.1--3e-3At1g0110060S acidic ribosomal protein P1 (RPP1A)O.I.H.G.S.X.
0.023.20.931609309_atCF568890--4e-43At3g48890ATMP2O.I.H.G.S.X.
0.012.10.911622213_atCF568924--6e-2At3g12200AtNek7 (NIMA-related kinase7)O.I.H.G.S.X.
0.012.10.931614949_x_atCF202459.1--3e-3At1g0110060S acidic ribosomal protein P1 (RPP1A)O.I.H.G.S.X.
-0.50.881608823_atCF205720.1--4e-7At3g52660RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.491.3GSM436428V. riparia (VR, PI588259) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436427V. riparia (VR, PI588259) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM436429V. riparia (VR, PI588259) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.886.0GSM287866Green hard berry B21 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.683.3GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.581.7GSM436419V. riparia (VR, PI588259) SD, 13h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.581.7GSM436370Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.581.7GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.479.9GSM436357Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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