Co-expression analysis

Gene ID	1611997_at
Gene name	hypothetical protein LOC100249691
Homology with Arabidopsis	Similar to At5g55660: - (HF=4e-2)
Module size	9 genes
NF	0.44
%ile	65.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	83.2	0.96	1611997_at	CA812801	hypothetical protein LOC100249691	-	4e-2	At5g55660	-	O.I.	H.G.	S.X.	Please select
0.52	73.9	0.97	1611218_at	CB912267	hypothetical LOC100261590	-	3e-1	At1g66360	C2 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.97	1618098_at	CB979528	hypothetical protein LOC100244989	-	8e-1	At5g63135	unknown protein	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.97	1617258_at	CF516015	hypothetical protein LOC100245053	-	4e+0	At5g23060	CaS (Calcium sensing receptor)	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.97	1614642_at	CF205407.1	-	-	6e+0	At5g53730	harpin-induced family protein / HIN1 family protein / harpin-responsive family protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.98	1615091_at	CD801426	hypothetical protein LOC100242289	-	2e-2	At1g13770	-	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.97	1619134_at	CB971759	-	-	2e+0	At5g53720	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.98	1606676_at	CF403737	hypothetical protein LOC100245560	-	9e-2	At1g05060	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.97	1612717_s_at	CA814430	hypothetical protein LOC100259033	-	1e+0	At1g01225	NC domain-containing protein-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.0	96.7	GSM299457	C_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.8	96.4	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.6	96.0	GSM147687	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	16
3.5	95.7	GSM287901	Red soft berry C16 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.3	95.2	GSM147705	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	34
3.3	95.2	GSM287897	Red soft berry C29 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.2	94.9	GSM287902	Red soft berry C30 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.1	94.6	GSM287898	Red soft berry B14 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.1	94.6	GSM287900	Red soft berry C15 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.9	93.8	GSM287904	Red soft berry C31 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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