Co-expression analysis

Gene ID	1611994_a_at
Gene name	hypothetical protein LOC100260925
Homology with Arabidopsis	Similar to At1g32230: RCD1 (RADICAL-INDUCED CELL DEATH1) (HF=7e-8)
Module size	7 genes
NF	0.55
%ile	82.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.39	54.9	0.98	1611994_a_at	CF214487	hypothetical protein LOC100260925	-	7e-8	At1g32230	RCD1 (RADICAL-INDUCED CELL DEATH1)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1614946_at	CF510992	hypothetical protein LOC100258219	-	8e-64	At4g24820	26S proteasome regulatory subunit, putative (RPN7)	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.98	AFFX-Vvi-actin-5_at		actin 1	-			-	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.98	1607136_at	CF605014	hypothetical protein LOC100257366	-	4e-28	At4g38630	RPN10 (REGULATORY PARTICLE NON-ATPASE 10)	O.I.	H.G.	S.X.	Please select
0.59	80.6	0.98	1617936_at	BQ797736	similar to 26S proteasome subunit RPN5b	-	3e-23	At5g64760	RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B)	O.I.	H.G.	S.X.	Please select
0.52	73.9	0.98	1616733_s_at	CB981317	hypothetical protein LOC100255975	-	1e-3	At5g56610	dual specificity protein phosphatase family protein	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.98	1620627_at	CF214379	hypothetical protein LOC100259195	-	1e-22	At1g20110	zinc finger (FYVE type) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.6	92.5	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.3	90.7	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.2	89.9	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
1.9	87.2	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
1.8	86.0	GSM147725	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	54
1.8	86.0	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
1.8	86.0	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
1.8	86.0	GSM147712	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	41
1.7	84.7	GSM147737	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	66
1.7	84.7	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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