Co-expression analysis

Gene ID 1611994_a_at
Gene name hypothetical protein LOC100260925
Homology with ArabidopsisSimilar to At1g32230: RCD1 (RADICAL-INDUCED CELL DEATH1) (HF=7e-8)
Module size 7 genes
NF 0.55
%ile 82.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.3954.90.981611994_a_atCF214487hypothetical protein LOC100260925-7e-8At1g32230RCD1 (RADICAL-INDUCED CELL DEATH1)O.I.H.G.S.X.
0.6787.90.981614946_atCF510992hypothetical protein LOC100258219-8e-64At4g2482026S proteasome regulatory subunit, putative (RPN7)O.I.H.G.S.X.
0.6183.20.98AFFX-Vvi-actin-5_atactin 1--O.I.H.G.S.X.
0.6081.90.981607136_atCF605014hypothetical protein LOC100257366-4e-28At4g38630RPN10 (REGULATORY PARTICLE NON-ATPASE 10)O.I.H.G.S.X.
0.5980.60.981617936_atBQ797736similar to 26S proteasome subunit RPN5b-3e-23At5g64760RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B)O.I.H.G.S.X.
0.5273.90.981616733_s_atCB981317hypothetical protein LOC100255975-1e-3At5g56610dual specificity protein phosphatase family proteinO.I.H.G.S.X.
0.4666.50.981620627_atCF214379hypothetical protein LOC100259195-1e-22At1g20110zinc finger (FYVE type) family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.692.5GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.390.7GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.289.9GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
1.987.2GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
1.886.0GSM147725Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation54Link to GEO
1.886.0GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
1.886.0GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
1.886.0GSM147712Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation41Link to GEO
1.784.7GSM147737Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation66Link to GEO
1.784.7GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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