Co-expression analysis

Gene ID 1611969_at
Gene name
Homology with ArabidopsisSimilar to At5g43401: - (HF=2e+0)
Module size 14 genes
NF 0.18
%ile 26.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9699.70.891611969_atCF513079--2e+0At5g43401-O.I.H.G.S.X.
0.4464.10.971606657_s_atCF200675.1similar to RNA polymerase beta subunit-2e-19Atcg00170-O.I.H.G.S.X.
0.4260.10.971622010_atCF207538similar to RNA polymerase alpha subunit-0Atcg00740-O.I.H.G.S.X.
0.4057.70.941616709_s_atCF205137.1similar to RNA polymerase beta subunit-5e-167Atcg00170-O.I.H.G.S.X.
0.3243.10.971614503_atCB972598--0Atcg00740-O.I.H.G.S.X.
0.2530.50.971618476_s_atCF214733--7e-98Atcg00040-O.I.H.G.S.X.
0.2124.00.971608952_atCF414365hypothetical protein LOC100254862-9e-33At3g06730thioredoxin family proteinO.I.H.G.S.X.
0.1920.90.951609987_atCA817301hypothetical protein LOC100258266-4e-1At3g53470unknown proteinO.I.H.G.S.X.
0.1920.90.921619933_s_atCB974435--2e+0At2g18969-O.I.H.G.S.X.
0.1414.40.961608437_s_atCD712894hypothetical protein LOC100261000-9e-6At1g73885unknown proteinO.I.H.G.S.X.
0.1212.10.931613771_atCF210312--1e+0At2g46000unknown proteinO.I.H.G.S.X.
0.1212.10.941618495_atCF404004--1e-6At1g31800CYP97A3 (CYTOCHROME P450-TYPE MONOOXYGENASE 97A3)O.I.H.G.S.X.
0.077.80.901619588_atCF510577--4e+0At4g00280-O.I.H.G.S.X.
0.066.80.911608001_atCB982653hypothetical protein LOC100247409-7e-2At1g52830IAA6 (INDOLE-3-ACETIC ACID 6)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.896.4GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.094.2GSM299456C_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.692.5GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.591.9GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
2.591.9GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.491.3GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
2.491.3GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.491.3GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.390.7GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.189.1GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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