Co-expression analysis

Gene ID 1611953_at
Gene name
Homology with ArabidopsisSimilar to At1g11860: aminomethyltransferase, putative (HF=1e+0)
Module size 12 genes
NF 0.32
%ile 45.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7491.00.921611953_atCB968896--1e+0At1g11860aminomethyltransferase, putativeO.I.H.G.S.X.
0.4158.70.931619424_atBQ800205hypothetical protein LOC100267695-5e-9At4g23550WRKY29O.I.H.G.S.X.
0.3650.70.931615244_atBQ799114--4e+0At5g16390CAC1 (CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1)O.I.H.G.S.X.
0.3548.50.961618643_atCF208002hypothetical protein LOC100248183-7e-1At3g09930GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.3345.70.931614434_atCF208520hypothetical protein LOC100257695-3e-10At1g73600methyltransferase/ phosphoethanolamine N-methyltransferaseO.I.H.G.S.X.
0.3243.10.961607061_atCF214698hypothetical protein LOC100251235-2e-20At1g75060unknown proteinO.I.H.G.S.X.
0.3243.10.961622725_atCF513192hypothetical protein LOC100260366-7e+0At5g28490LSH1 (LIGHT-DEPENDENT SHORT HYPOCOTYLS 1)O.I.H.G.S.X.
0.2937.70.941619436_atCF372293hypothetical protein LOC100268063-5e-3At5g11930glutaredoxin family proteinO.I.H.G.S.X.
0.2937.70.961620170_atCB974375hypothetical protein LOC100246815-1e-4At4g36920AP2 (APETALA 2)O.I.H.G.S.X.
0.2530.50.961618875_s_atCF214574hypothetical protein LOC100266914-1e-1At1g51950IAA18 (INDOLE-3-ACETIC ACID INDUCIBLE 18)O.I.H.G.S.X.
0.1819.40.941613573_atCF609267hypothetical protein LOC100260045-6e-33At1g53860remorin family proteinO.I.H.G.S.X.
0.1515.60.951608603_atBQ795705hypothetical LOC100242108-3e-13At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.893.4GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
2.692.5GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.591.9GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.491.3GSM436394V. riparia (VR, PI588259) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
2.390.7GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.289.9GSM147730Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation59Link to GEO
2.189.1GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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