Co-expression analysis

Gene ID	1611922_at
Gene name	hypothetical protein LOC100245782
Homology with Arabidopsis	Similar to At3g49770: unknown protein (HF=2e-1)
Module size	6 genes
NF	0.16
%ile	25.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.36	50.7	0.96	1611922_at	CD799103	hypothetical protein LOC100245782	-	2e-1	At3g49770	unknown protein	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.96	1618726_at	CB973545	hypothetical protein LOC100265140	-	2e-27	At1g06410	ATTPS7	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.97	1618470_at	CD012303	hypothetical protein LOC100253407	-	2e+0	At3g30460	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.97	1617313_a_at	CF513789	hypothetical protein LOC100256994	-	2e-2	At1g64040	TOPP3	O.I.	H.G.	S.X.	Please select
0.10	10.3	0.96	1611826_at	CB977629	hypothetical protein LOC100262670	-	2e-9	At4g25500	ATRSP35	O.I.	H.G.	S.X.	Please select
0.09	9.4	0.96	1622402_at	CD799344	hypothetical protein LOC100241730	-	4e+0	At3g15260	protein phosphatase 2C, putative / PP2C, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.6	98.9	GSM287875	Green hard berry C17 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
6.4	98.9	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
4.7	97.7	GSM287895	Pink soft berry B13 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.7	96.2	GSM287889	Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.0	88.2	GSM147672	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	1
1.9	87.2	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
1.9	87.2	GSM287877	Green hard berry B12 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
1.9	87.2	GSM287887	Green soft berry C23 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
1.9	87.2	GSM436409	V. riparia (VR, PI588259) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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