Co-expression analysis

Gene ID 1611882_at
Gene name hypothetical protein LOC100268072
Homology with ArabidopsisSimilar to At5g62000: ARF2 (AUXIN RESPONSE FACTOR 2) (HF=7e-13)
Module size 7 genes
NF 0.48
%ile 72.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5980.60.971611882_atCF512921hypothetical protein LOC100268072-7e-13At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)O.I.H.G.S.X.
0.6787.90.971618094_atCB340258hypothetical protein LOC100261032-3e-27At4g33140unknown proteinO.I.H.G.S.X.
0.5375.20.981620327_atCF403603hypothetical protein LOC100259936-4e+0At2g30370allergen-relatedO.I.H.G.S.X.
0.4057.70.981620349_atBQ799759hypothetical protein LOC100263124-8e-7At4g39860unknown proteinO.I.H.G.S.X.
0.4057.70.981611225_atCK138225.1--4e-10At4g22360SWIB complex BAF60b domain-containing proteinO.I.H.G.S.X.
0.3650.70.971612954_atCF404452hypothetical protein LOC100257012-4e-1At3g55070-O.I.H.G.S.X.
0.3548.50.981611673_atBQ799478hypothetical protein LOC100267328-4e+0At5g06000EIF3G2O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.299.1GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
6.999.1GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
5.798.5GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.497.3GSM436368Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
4.196.9GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.096.7GSM147672Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation1Link to GEO
3.595.7GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
3.395.2GSM436390V. riparia (VR, PI588259) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.993.8GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.692.5GSM436376Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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