Co-expression analysis

Gene ID 1611872_at
Gene name hypothetical protein LOC100266256
Homology with ArabidopsisSimilar to At2g26640: KCS11 (3-KETOACYL-COA SYNTHASE 11) (HF=8e-50)
Module size 6 genes
NF 0.45
%ile 67.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.941611872_atCF404465hypothetical protein LOC100266256-8e-50At2g26640KCS11 (3-KETOACYL-COA SYNTHASE 11)O.I.H.G.S.X.
0.8093.60.901619877_atCA812572hypothetical protein LOC100257064-6e-6At2g40095unknown proteinO.I.H.G.S.X.
0.5072.70.931622107_atCB009545hypothetical protein LOC100259620-2e-40At5g55560protein kinase family proteinO.I.H.G.S.X.
0.3345.70.911610125_atCF209614--1e-3At2g41540GPDHC1O.I.H.G.S.X.
0.3345.70.921617959_s_atCA809016hypothetical protein LOC100243044-6e-12At3g05550hypoxia-responsive family proteinO.I.H.G.S.X.
0.2428.70.911610356_atCB980194hypothetical protein LOC100262760-2e-3At5g12010unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.196.9GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.696.0GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.495.5GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.294.9GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
3.194.6GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.094.2GSM322370genotype: Incrocio Manzoni - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.094.2GSM147709Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation38Link to GEO
2.993.8GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO
2.893.4GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.793.0GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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