Co-expression analysis

Gene ID	1611870_at
Gene name	hypothetical protein LOC100247177
Homology with Arabidopsis	Similar to At5g09740: HAM2 (histone acetyltransferase of the MYST family 2) (HF=8e-152)
Module size	6 genes
NF	0.44
%ile	66.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.99	1611870_at	CF414975	hypothetical protein LOC100247177	-	8e-152	At5g09740	HAM2 (histone acetyltransferase of the MYST family 2)	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.99	1615804_at	CF403733	-	-	4e-2	At5g65910	BSD domain-containing protein	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.99	1612043_at	CF210844	hypothetical protein LOC100256975	-	5e-41	At5g62610	basic helix-loop-helix (bHLH) family protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.99	1613582_at	CF204478.1	hypothetical protein LOC100261825	-	6e-12	At5g14170	CHC1	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.99	1612922_at	BQ795022	similar to FHY3 (FAR-RED ELONGATED HYPOCOTYLS 3); transcription factor	-	1e+0	At1g02510	TPK4	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.99	1613769_at	CB970019	hypothetical protein LOC100265267	-	4e-48	At1g51690	ATB ALPHA	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.8	93.4	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.8	93.4	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
2.6	92.5	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
2.6	92.5	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.5	91.9	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.4	91.3	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.4	91.3	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.4	91.3	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.3	90.7	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.3	90.7	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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