Co-expression analysis

Gene ID 1611859_at
Gene name hypothetical protein LOC100263524
Homology with ArabidopsisSimilar to At1g12820: AFB3 (AUXIN SIGNALING F-BOX 3) (HF=2e-13)
Module size 9 genes
NF 0.53
%ile 79.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5779.80.981611859_atCF210940hypothetical protein LOC100263524-2e-13At1g12820AFB3 (AUXIN SIGNALING F-BOX 3)O.I.H.G.S.X.
0.7189.50.991612461_atCB969270hypothetical protein LOC100257379-1e-1At3g10220tubulin folding cofactor BO.I.H.G.S.X.
0.5375.20.991617105_atCB982332similar to putative calcium-dependent protein kinase CPK1 adapter protein 2-6e-20At5g66250kinectin-relatedO.I.H.G.S.X.
0.5273.90.991608813_s_atBQ795140hypothetical protein LOC100255523-5e-84At1g78870UBC35 (UBIQUITIN-CONJUGATING ENZYME 35)O.I.H.G.S.X.
0.5072.70.991614112_atBQ797230hypothetical protein LOC100252349-3e-11At5g42190ASK2 (ARABIDOPSIS SKP1-LIKE 2)O.I.H.G.S.X.
0.5072.70.991620599_atCF414825hypothetical protein LOC100246051 /// hypothetical protein LOC100256250-5e+0At5g2029040S ribosomal protein S8 (RPS8A)O.I.H.G.S.X.
0.4868.80.991617960_atCF510934hypothetical protein LOC100259803-1e-119At5g36230eIF4-gamma/eIF5/eIF2-epsilon domain-containing proteinO.I.H.G.S.X.
0.4361.50.991615080_atCB921263hypothetical protein LOC100267377-7e-3At3g52660RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.3853.60.991606718_atCA817648hypothetical protein LOC100254624-2e-93At5g17060ATARFB1BO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.294.9GSM436393V. riparia (VR, PI588259) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.194.6GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.993.8GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
2.893.4GSM436396V. riparia (VR, PI588259) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.893.4GSM436390V. riparia (VR, PI588259) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM436413V. riparia (VR, PI588259) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.390.7GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
1.987.2GSM299454B_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.987.2GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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