Co-expression analysis

Gene ID	1611826_at
Gene name	hypothetical protein LOC100262670
Homology with Arabidopsis	Similar to At4g25500: ATRSP35 (HF=2e-9)
Module size	6 genes
NF	0.49
%ile	73.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	89.5	0.97	1611826_at	CB977629	hypothetical protein LOC100262670	-	2e-9	At4g25500	ATRSP35	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.97	1610763_at	CD714601	hypothetical protein LOC100263330	-	1e+0	At3g48880	F-box family protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1617401_at	CF210307	hypothetical protein LOC100263342	-	1e-1	At5g66730	zinc finger (C2H2 type) family protein	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.97	1613145_at	CF215652	hypothetical protein LOC100255313	-	6e-22	At5g47180	vesicle-associated membrane family protein / VAMP family protein	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.97	1610028_at	CB971485	hypothetical protein LOC100265404	-	4e-5	At5g48820	ICK6 (INHIBITOR/INTERACTOR WITH CYCLIN-DEPENDENT KINASE)	O.I.	H.G.	S.X.	Please select
0.15	15.6	0.97	1619851_at	CB978591	hypothetical protein LOC100267367	-	2e+0	At4g30880	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.7	99.5	GSM287889	Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
7.2	99.1	GSM287895	Pink soft berry B13 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
6.6	98.9	GSM287875	Green hard berry C17 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
5.9	98.6	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
5.9	98.6	GSM287894	Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
5.8	98.6	GSM287887	Green soft berry C23 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
5.0	98.0	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.8	97.8	GSM287896	Pink soft berry C27 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
4.8	97.8	GSM287891	Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
4.6	97.6	GSM287892	Pink soft berry C11 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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