Co-expression analysis

Gene ID	1611813_s_at
Gene name	hypothetical protein LOC100260422
Homology with Arabidopsis	Similar to At5g60460: sec61beta family protein (HF=1e-6)
Module size	6 genes
NF	0.52
%ile	77.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.98	1611813_s_at	BQ794797	hypothetical protein LOC100260422	-	1e-6	At5g60460	sec61beta family protein	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.98	1611545_at	CB972050	hypothetical protein LOC100260759	-	2e-14	At1g76200	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.98	1613705_at	CF517167	hypothetical protein LOC100264130	-	4e-27	At1g20200	EMB2719 (EMBRYO DEFECTIVE 2719)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1620903_at	CF605711	hypothetical protein LOC100260422	-	2e-12	At5g60460	sec61beta family protein	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.99	1608813_s_at	BQ795140	hypothetical protein LOC100255523	-	5e-84	At1g78870	UBC35 (UBIQUITIN-CONJUGATING ENZYME 35)	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.99	1614112_at	BQ797230	hypothetical protein LOC100252349	-	3e-11	At5g42190	ASK2 (ARABIDOPSIS SKP1-LIKE 2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.2	97.1	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
3.9	96.6	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.5	95.7	GSM436393	V. riparia (VR, PI588259) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.4	95.5	GSM436396	V. riparia (VR, PI588259) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.2	94.9	GSM436390	V. riparia (VR, PI588259) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.1	94.6	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
3.0	94.2	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.9	93.8	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.8	93.4	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.6	92.5	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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