Co-expression analysis

Gene ID	1611799_at
Gene name	hypothetical protein LOC100255639
Homology with Arabidopsis	Similar to At5g06700: unknown protein (HF=4e-4)
Module size	7 genes
NF	0.24
%ile	34.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	81.9	0.96	1611799_at	CB982194	hypothetical protein LOC100255639	-	4e-4	At5g06700	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.97	1613480_at	CF403988	hypothetical protein LOC100247977	-	3e+0	At2g02835	-	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.97	1616394_at	CB344590	hypothetical protein LOC100267852	-	1e+0	At3g51830	ATG5	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.97	1619005_at	CF206493.1	-	-	3e-14	At5g46410	NLI interacting factor (NIF) family protein	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.97	1616171_at	BM437490	hypothetical protein LOC100251471	-	3e-18	At5g48380	leucine-rich repeat family protein / protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.15	15.6	0.96	1610599_at	CF211001	hypothetical protein LOC100250338	-	7e+0	At5g16790	-	O.I.	H.G.	S.X.	Please select
0.14	14.4	0.96	1622116_at	BQ793439	hypothetical protein LOC100264025	-	4e-2	At4g01895	systemic acquired resistance (SAR) regulator protein NIMIN-1-related	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.3	95.2	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.0	94.2	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.9	93.8	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.8	93.4	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.6	92.5	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.3	90.7	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.3	90.7	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67
2.0	88.2	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.0	88.2	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
1.9	87.2	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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