Co-expression analysis

Gene ID 1611787_at
Gene name similar to C2 domain-containing protein / GRAM domain-containing protein
Homology with ArabidopsisSimilar to At4g16141: sequence-specific DNA binding / transcription factor/ zinc ion binding (HF=3e+0)
Module size 6 genes
NF 0.10
%ile 17.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8093.60.951611787_atBQ793628similar to C2 domain-containing protein / GRAM domain-containing protein-3e+0At4g16141sequence-specific DNA binding / transcription factor/ zinc ion bindingO.I.H.G.S.X.
0.3345.70.961612132_s_atCB341731hypothetical protein LOC100254745-2e-2At1g22280protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.2937.70.961610847_atCF413716--1e-2At5g02502unknown proteinO.I.H.G.S.X.
0.2734.00.951621834_atBQ794561hypothetical protein LOC100254175-2e-5At3g02600LPP3 (LIPID PHOSPHATE PHOSPHATASE 3)O.I.H.G.S.X.
0.066.80.961615383_atBQ793432hypothetical protein LOC100256151-1e-3At4g32272-O.I.H.G.S.X.
0.023.20.961613863_a_atCD801385hypothetical protein LOC100245383-4e-17At5g09920NRPB4O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.897.8GSM436409V. riparia (VR, PI588259) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
4.897.8GSM436350Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
4.196.9GSM147675Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation4Link to GEO
4.096.7GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.896.4GSM147684Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation13Link to GEO
3.896.4GSM436346Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.595.7GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.395.2GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.094.2GSM436411V. riparia (VR, PI588259) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.094.2GSM147697Vitis vinifera 'Cabernet sauvignon' mock inoculateds at 4 h post inoculation26Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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