Co-expression analysis

Gene ID	1611787_at
Gene name	similar to C2 domain-containing protein / GRAM domain-containing protein
Homology with Arabidopsis	Similar to At4g16141: sequence-specific DNA binding / transcription factor/ zinc ion binding (HF=3e+0)
Module size	6 genes
NF	0.10
%ile	17.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	93.6	0.95	1611787_at	BQ793628	similar to C2 domain-containing protein / GRAM domain-containing protein	-	3e+0	At4g16141	sequence-specific DNA binding / transcription factor/ zinc ion binding	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.96	1612132_s_at	CB341731	hypothetical protein LOC100254745	-	2e-2	At1g22280	protein phosphatase 2C, putative / PP2C, putative	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.96	1610847_at	CF413716	-	-	1e-2	At5g02502	unknown protein	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.95	1621834_at	BQ794561	hypothetical protein LOC100254175	-	2e-5	At3g02600	LPP3 (LIPID PHOSPHATE PHOSPHATASE 3)	O.I.	H.G.	S.X.	Please select
0.06	6.8	0.96	1615383_at	BQ793432	hypothetical protein LOC100256151	-	1e-3	At4g32272	-	O.I.	H.G.	S.X.	Please select
0.02	3.2	0.96	1613863_a_at	CD801385	hypothetical protein LOC100245383	-	4e-17	At5g09920	NRPB4	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.8	97.8	GSM436409	V. riparia (VR, PI588259) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
4.8	97.8	GSM436350	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
4.1	96.9	GSM147675	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	4
4.0	96.7	GSM436349	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.8	96.4	GSM147684	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	13
3.8	96.4	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.5	95.7	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.3	95.2	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM436411	V. riparia (VR, PI588259) SD, 13h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM147697	Vitis vinifera 'Cabernet sauvignon' mock inoculateds at 4 h post inoculation	26

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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