Co-expression analysis

Gene ID	1611765_at
Gene name	hypothetical protein LOC100248412
Homology with Arabidopsis	Similar to At5g19230: unknown protein (HF=2e+0)
Module size	6 genes
NF	0.03
%ile	7.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.91	1611765_at	BQ799728	hypothetical protein LOC100248412	-	2e+0	At5g19230	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.93	1612105_at	CF415846	hypothetical protein LOC100263066	-	4e-19	At2g26640	KCS11 (3-KETOACYL-COA SYNTHASE 11)	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.92	1614624_at	CB914237	hypothetical protein LOC100253628	-	1e+0	At5g61110	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.05	6.0	0.92	1618406_at	CB914237	-	-	1e+0	At5g61110	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.02	3.2	0.90	1611400_at	CF510785	hypothetical protein LOC100266087	-	1e+0	At5g30520	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.91	1615156_at	CF371936	hypothetical protein LOC100259291	-	1e+0	At1g15080	LPP2 (LIPID PHOSPHATE PHOSPHATASE 2)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.5	91.9	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.2	89.9	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
1.9	87.2	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
1.9	87.2	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
1.8	86.0	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.7	84.7	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
1.7	84.7	GSM287885	Green soft berry A22 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
1.7	84.7	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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