Co-expression analysis

Gene ID	1611755_at
Gene name	hypothetical protein LOC100246670
Homology with Arabidopsis	Similar to At2g33040: ATP synthase gamma chain, mitochondrial (ATPC) (HF=4e-27)
Module size	8 genes
NF	0.48
%ile	72.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.88	95.4	0.98	1611755_at	CB918301	hypothetical protein LOC100246670	-	4e-27	At2g33040	ATP synthase gamma chain, mitochondrial (ATPC)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1614881_at	CF210464	hypothetical protein LOC100261031	-	1e-153	At5g08670	ATP binding / hydrogen ion transporting ATP synthase, rotational mechanism	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.99	1610327_at	CB972987	hypothetical protein LOC100259544	-	3e-160	At5g08690	ATP synthase beta chain 2, mitochondrial	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.98	1609881_at	BQ792085	26S proteasome regulatory subunit	-	3e-169	At1g53750	RPT1A (REGULATORY PARTICLE TRIPLE-A 1A)	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.98	1619827_at	CF215908	hypothetical protein LOC100245612	-	1e-27	At5g63400	ADK1 (ADENYLATE KINASE 1)	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.99	1608146_at	CF415273	hypothetical protein LOC100253931	-	3e-14	At1g47420	-	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.98	1612829_at	BQ797707	hypothetical protein LOC100247114	-	2e-93	At4g34720	AVA-P1	O.I.	H.G.	S.X.	Please select
0.26	32.0	0.98	1609752_at	CF213671	hypothetical protein LOC100257494	-	2e-43	At5g13430	ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.8	93.4	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47
2.2	89.9	GSM299459	D_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.2	89.9	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.1	89.1	GSM147686	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	15
2.1	89.1	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.0	88.2	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
1.9	87.2	GSM147715	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	44
1.9	87.2	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
1.9	87.2	GSM147719	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	48

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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