Co-expression analysis

Gene ID	1611714_at
Gene name	hypothetical protein LOC100264866
Homology with Arabidopsis	Similar to At2g42500: PP2A-4 (HF=2e-61)
Module size	9 genes
NF	0.64
%ile	90.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	93.6	0.97	1611714_at	BQ794807	hypothetical protein LOC100264866	-	2e-61	At2g42500	PP2A-4	O.I.	H.G.	S.X.	Please select
0.75	91.3	0.98	1609364_at	CD013445	similar to thioredoxin-related protein	-	8e-6	At3g56580	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.97	1622665_s_at	CF215188	hypothetical protein LOC100246461	-	5e+0	At5g19257	unknown protein	O.I.	H.G.	S.X.	Please select
0.64	84.7	0.97	1611538_at	CB976216	hypothetical protein LOC100258505	-	3e-12	At2g35630	MOR1 (MICROTUBULE ORGANIZATION 1)	O.I.	H.G.	S.X.	Please select
0.57	79.8	0.97	1612328_at	CF212371	hypothetical protein LOC100247770	-	6e+0	At5g07510	GRP14	O.I.	H.G.	S.X.	Please select
0.56	79.4	0.98	1616820_at	CF210812	-	-	2e-1	At3g27835	-	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.98	1618126_at	CF213298	hypothetical protein LOC100261549	-	3e-8	At1g76660	-	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.97	1615059_at	CF212962	hypothetical protein LOC100246880	-	2e+0	At2g20463	-	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.98	1612954_at	CF404452	hypothetical protein LOC100257012	-	4e-1	At3g55070	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.3	90.7	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.1	89.1	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
2.0	88.2	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM147730	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	59
1.8	86.0	GSM147712	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	41
1.7	84.7	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
1.7	84.7	GSM436429	V. riparia (VR, PI588259) SD, 13h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.6	83.3	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.6	83.3	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
1.6	83.3	GSM287903	Red soft berry A7 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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