Co-expression analysis

Gene ID	1611698_at
Gene name	hypothetical protein LOC100263780
Homology with Arabidopsis	Similar to At5g65360: histone H3 (HF=2e+0)
Module size	6 genes
NF	0.27
%ile	38.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	72.7	0.98	1611698_at	CA812037	hypothetical protein LOC100263780	-	2e+0	At5g65360	histone H3	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1611343_at	CB974830	hypothetical protein LOC100261168	-	6e+0	At3g15210	ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.98	1618717_at	CB969401	hypothetical protein LOC100253557	-	7e-19	At3g46220	unknown protein	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.98	1621862_at	CF510931	hypothetical protein LOC100267900	-	2e+0	At1g15930	40S ribosomal protein S12 (RPS12A)	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.98	1614287_at	CF510757	hypothetical protein LOC100243855	-	1e-16	At2g20650	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.98	1606771_at	CF517362	-	-	3e-39	At4g00660	DEAD/DEAH box helicase, putative	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.7	98.5	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
5.6	98.4	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
4.7	97.7	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.9	96.6	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.4	95.5	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
3.3	95.2	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
3.1	94.6	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.9	93.8	GSM299454	B_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.7	93.0	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.7	93.0	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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